Yes, some teachers do this and have done this for a long time. Previously, they notified students in a little green box (for status updates) on their profile or included it in the course titles, specifying that it was a 55-minute lesson, not 60, or 25 as opposed 30. They do this because many teachers have to work several hours in a row, and that's not humanly possible without a short break to stretch, use the bathroom, maybe eat or drink something.
I don't do this, because I don't teach more than 2.5 hours in a row as a matter of preference. I don't like speaking longer than that and don't think I'm giving my best beyond that. However, I am glad that italki has written this officially, to show support for teachers who do need breaks and have to work more hours in a row.
If 5 minutes makes a big difference to you as a student, ask the teacher about their personal policy before you start taking regular lessons.