I don't know the song but if going on available evidence its probably some sort of love song.
The lyrics mean that the feeling he has cannot stop (or deny) him from acting as he chooses, even if he knows it might not be a good idea.
For example: you might know it isn't a good idea to date your friend's wife and you have a feeling that tells you this. However that feeling cannot deny/stop you from acting as you want because you and she have fallen in love.
Hopefully this clarifies it for you.