Examples:
The below examples are in the context of irritating somebody:
"Do not leave your dishes in the sink, lest you alienate your housemates!" - here, alienate means to annoy or aggravate; by leaving dishes in the sink, which your housemates dislike, you risk displeasing/alienating them.
"The misogynist comments made by the Prime Minister alienated his female supporters."
Then there is the other meaning, and an example sentence may be:
"Living in a foreign country and unable to speak the language, I feel so alienated."
The person is having difficulties assimilating and hence feels estranged.
I hope the above makes it clear?