Well,
"Go in" and "Go into" have the same meaning yes. But they're both tricky.
~"Go in" I never EVER hear unless It's used as a demand (Someone else telling you to "go in" something)
~ If you were talking about yourself you would normally say "Going into" "Going in" or "Going inside"
~Also, they are usually said as "Going in" "Going into" "Going inside" etc.(Unless another verb was used with is (eg: will, would, should, want to, etc)
Examples: Go in-
Go in(inside) the store.
Go in(inside) the house
Go in(inside) the building.
(Someone else telling you to go in~)
Go(going) into-
I am going into the building.
I will go into the building.
I am going to your house.
I will go to your house.
I probably confused you, this was so hard to explain haha!