I've never heard anyone use the word 'clunker' in relation to a car or anything else. If you want to talk about a car in a disparaging but jocular manner then call it a 'rust bucket' or a 'jalopy' or an 'old banger'.
'Snug' usually has a positive connotation. So I wouldn't tend to talk about a 'snug pair of gloves or pants' because that sounds too uncomfortable for the core idea behind the word. But I would feel snug when lying in bed, wrapped up in my quilt. I might even 'snuggle up' to someone if I were in a good mood.
Another meaning of 'snug' in older contexts was a small cubicle in a pub. Some pubs used to have a number of snugs separated from the main bar by curtains, in which you could have a private chat without being drawn into the general merriment. The only place I know of that still has snugs today is the Alehouse (formerly the Hobgoblin) in Reading, Berkshire.