So, to sum up (ha ha), I would say, that in speaking, "very many" in a negative phrase (such as: There aren't very many bees left.) is common and acceptable. But, I don't think I would use "very many" in a positive phrase, because in this case, it does seem redundant.
We went to the countryside, where it was dark, and we saw very many stars in the sky.
What? We can just say "many stars."
Frankly, I would also never say "There are very many trees in a forest." This is not a judgement of anyone else's English, just an observation: that the phrase "very many" may be more common in some dialects of English than others.
In writing, I agree with Randy. To make your writing crisper and snappier and to allow nouns to contain their full power, avoid using "very" if at all possible.
For instance, if I write:
That mineral is very rare.
"Very" serves no purpose in the sentence and robs the word "rare" of its meaning. In other words, something is either rare or it is not. Take "very expensive," well, again, something is either expensive or it is not.
Almost every usage of very is very similar. Ha. I mean similar. I even try to avoid writing "very good" if possible.