I use that construction a lot. I mean that it happens less than "common" but more than "uncommon."
So, if someone asked "Are there always early morning meetings?"
If there were early morning meetings every day - I would say "Yes."
If there were 3 meetings/week, I would say "It's pretty common."
If the last time this happened was last year, I would say "Never."
If it happens about 3 times a year, I would say "It's uncommon."
But if we end up having about one or two meetings a month... that's too infrequently to be "common." But it happens too much to be "uncommon." So "It's not uncommon" with a stress on the "not" and the "un."