"Ski laufen" and "Ski fahren" are synonyms, however, "Ski fahren" is used more frequently.
But as to word order, it must be "Fährst/Läufst Du gern Ski?" (there's inversion in yes/no-questions, i.e. the verb comes first) and "Ich fahre/laufe (gern) Ski" (the verb must be in the 2nd position)
Hope this helps.